All strains

ILSM1001

• Vibrio chagasii
Pseudomonadota 99.8% 16S Similarity (Ref: R-3712) Mahanadi transact • 300 m (Water) WGS Sequenced
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Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 99.8%
EzCloud Identification & Lineage Hierarchy
Identified Species: Vibrio chagasii Ref Strain: R-3712
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Gammaproteobacteria Order: Vibrionales Family: Vibrionaceae Genus: Vibrio
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Mahanadi transact
Collection Depth: 300 m
Transect Distance: 300 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
4,484
Total CDS Genes
124 tRNA • 12 rRNA
4.93 Mbp
Assembly Size
GC: 44.2% • 197 Contigs
166
CAZyme Genes
62 high-confidence (3 tools)
148
Industrial Enzymes
11 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM1001 Assembly Type Draft
Total CDS Genes 4,484 Total Assembly Length 4,930,784 bp (4.93 Mbp)
tRNA / rRNA Genes 124 tRNA / 12 rRNA GC Content (%) 44.20%
Simple Repeats / Low-Complexity 149 repeats / 20 low-comp Contigs / N50 197 contigs • N50: 77,498 bp (L50 = 20)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 78 GH • 58 GT • 8 CE • 1 PL • 7 AA • 32 CBM N90 / auN Metric N90: 17,304 bp • auN: 93,508.5
Industrial Enzymes Detected 148 genes across 11 classes (Lignin peroxidase, Protease, Phosphatase, Esterase, Lipase, Amylase, Beta-glucosidase, Laccase...)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM1001

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.