All strains

ILSM1006

• Staphylococcus epidermidis
Bacillota 100% 16S Similarity (Ref: NCTC 11047) Mahanadi transact • 300 m (Water) WGS Sequenced
Search Files in Index
Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 100%
EzCloud Identification & Lineage Hierarchy
Identified Species: Staphylococcus epidermidis Ref Strain: NCTC 11047
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Bacillota Class: Bacilli Order: Staphylococcales Family: Staphylococcaceae Genus: Staphylococcus
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Mahanadi transact
Collection Depth: 300 m
Transect Distance: 300 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
4,889
Total CDS Genes
133 tRNA • 9 rRNA
5.22 Mbp
Assembly Size
GC: 32.5% • 70 Contigs
208
CAZyme Genes
68 high-confidence (3 tools)
178
Industrial Enzymes
8 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM1006 Assembly Type Draft
Total CDS Genes 4,889 Total Assembly Length 5,218,739 bp (5.22 Mbp)
tRNA / rRNA Genes 133 tRNA / 9 rRNA GC Content (%) 32.52%
Simple Repeats / Low-Complexity 481 repeats / 142 low-comp Contigs / N50 70 contigs • N50: 181,435 bp (L50 = 8)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 94 GH • 84 GT • 15 CE • 0 PL • 3 AA • 20 CBM N90 / auN Metric N90: 40,195 bp • auN: 256,014.1
Industrial Enzymes Detected 178 genes across 8 classes (Lignin peroxidase, Protease, Phosphatase, Urease, Esterase, Lipase, Beta-glucosidase, Laccase)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM1006

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.