All strains

ILSM1031

• Pseudoalteromonas shioyasakiensis
Pseudomonadota 99.93% 16S Similarity (Ref: SE3) Mahanadi transact • 300 m (Water) WGS Sequenced
Search Files in Index
Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 99.93%
EzCloud Identification & Lineage Hierarchy
Identified Species: Pseudoalteromonas shioyasakiensis Ref Strain: SE3
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Gammaproteobacteria Order: Alteromonadales Family: Pseudoalteromonadaceae Genus: Pseudoalteromonas
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Mahanadi transact
Collection Depth: 300 m
Transect Distance: 50 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
4,191
Total CDS Genes
143 tRNA • 3 rRNA
4.64 Mbp
Assembly Size
GC: 41.4% • 175 Contigs
181
CAZyme Genes
70 high-confidence (3 tools)
135
Industrial Enzymes
10 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM1031 Assembly Type Draft
Total CDS Genes 4,191 Total Assembly Length 4,636,506 bp (4.64 Mbp)
tRNA / rRNA Genes 143 tRNA / 3 rRNA GC Content (%) 41.35%
Simple Repeats / Low-Complexity 190 repeats / 25 low-comp Contigs / N50 175 contigs • N50: 73,592 bp (L50 = 19)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 91 GH • 54 GT • 13 CE • 0 PL • 11 AA • 33 CBM N90 / auN Metric N90: 14,089 bp • auN: 96,239.9
Industrial Enzymes Detected 135 genes across 10 classes (Lignin peroxidase, Protease, Phosphatase, Glutaminase, Esterase, Xylanase, Lipase, Chitinase...)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM1031

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.