All strains

ILSM1160

• Salinicola salarius
Pseudomonadota 99.7% 16S Similarity (Ref: M27) Mahanadi transact • 20 m (Water) WGS Sequenced
Search Files in Index
Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 99.7%
EzCloud Identification & Lineage Hierarchy
Identified Species: Salinicola salarius Ref Strain: M27
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Gammaproteobacteria Order: Oceanospirillales Family: Halomonadaceae Genus: Salinicola
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Mahanadi transact
Collection Depth: 20 m
Transect Distance: 10 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
3,924
Total CDS Genes
82 tRNA • 8 rRNA
4.20 Mbp
Assembly Size
GC: 62.7% • 467 Contigs
181
CAZyme Genes
65 high-confidence (3 tools)
130
Industrial Enzymes
9 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM1160 Assembly Type Draft
Total CDS Genes 3,924 Total Assembly Length 4,198,033 bp (4.20 Mbp)
tRNA / rRNA Genes 82 tRNA / 8 rRNA GC Content (%) 62.67%
Simple Repeats / Low-Complexity 422 repeats / 13 low-comp Contigs / N50 467 contigs • N50: 47,579 bp (L50 = 31)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 64 GH • 85 GT • 8 CE • 4 PL • 14 AA • 20 CBM N90 / auN Metric N90: 4,825 bp • auN: 46,766.2
Industrial Enzymes Detected 130 genes across 9 classes (Lignin peroxidase, Protease, Phosphatase, Urease, Esterase, Lipase, Laccase, Alginate lyase...)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM1160

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.