All strains

ILSM1235

• Pseudomonas psychrophila
Pseudomonadota 99.9% 16S Similarity (Ref: E-3) Mahanadi transact • 20 m (Sediment) WGS Sequenced
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Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 99.9%
EzCloud Identification & Lineage Hierarchy
Identified Species: Pseudomonas psychrophila Ref Strain: E-3
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Gammaproteobacteria Order: Pseudomonadales Family: Pseudomonadaceae Genus: Pseudomonas
Oceanographic Collection Provenance
Sample Matrix: Sediment
Sampling Location: Mahanadi transact
Collection Depth: 20 m
Transect Distance: —

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
3,724
Total CDS Genes
79 tRNA • 6 rRNA
3.67 Mbp
Assembly Size
GC: 41.3% • 39 Contigs
194
CAZyme Genes
78 high-confidence (3 tools)
160
Industrial Enzymes
10 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM1235 Assembly Type Draft
Total CDS Genes 3,724 Total Assembly Length 3,666,546 bp (3.67 Mbp)
tRNA / rRNA Genes 79 tRNA / 6 rRNA GC Content (%) 41.29%
Simple Repeats / Low-Complexity 0 repeats / 0 low-comp Contigs / N50 39 contigs • N50: 435,302 bp (L50 = 4)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 83 GH • 63 GT • 28 CE • 2 PL • 4 AA • 23 CBM N90 / auN Metric N90: 62,338 bp • auN: 337,099.2
Industrial Enzymes Detected 160 genes across 10 classes (Lignin peroxidase, Protease, Phosphatase, Esterase, Glutaminase, Beta-glucosidase, Lipase, Xylanase...)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM1235

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.