All strains

ILSM1514

• Pseudoalteromonas shioyasakiensis
Pseudomonadota 99.76% 16S Similarity (Ref: MEBiC 03607) Vizag transact • 300 m (Water) WGS Sequenced
Search Files in Index
Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 99.76%
EzCloud Identification & Lineage Hierarchy
Identified Species: Pseudoalteromonas shioyasakiensis Ref Strain: MEBiC 03607
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Gammaproteobacteria Order: Alteromonadales Family: Pseudoalteromonadaceae Genus: Pseudoalteromonas
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Vizag transact
Collection Depth: 300 m
Transect Distance: —

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
3,894
Total CDS Genes
105 tRNA • 4 rRNA
4.41 Mbp
Assembly Size
GC: 40.8% • 49 Contigs
180
CAZyme Genes
67 high-confidence (3 tools)
128
Industrial Enzymes
10 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM1514 Assembly Type Draft
Total CDS Genes 3,894 Total Assembly Length 4,414,607 bp (4.41 Mbp)
tRNA / rRNA Genes 105 tRNA / 4 rRNA GC Content (%) 40.82%
Simple Repeats / Low-Complexity 133 repeats / 38 low-comp Contigs / N50 49 contigs • N50: 246,091 bp (L50 = 6)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 86 GH • 57 GT • 13 CE • 0 PL • 11 AA • 35 CBM N90 / auN Metric N90: — • auN: —
Industrial Enzymes Detected 128 genes across 10 classes (Lignin peroxidase, Protease, Phosphatase, Glutaminase, Esterase, Beta-glucosidase, Amylase, Lipase...)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM1514

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.