All strains

ILSM1520

• Pseudoalteromonas shioyasakiensis
Pseudomonadota 100% 16S Similarity (Ref: SE3) Vizag transact • 300 m (Water) WGS Sequenced
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Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 100%
EzCloud Identification & Lineage Hierarchy
Identified Species: Pseudoalteromonas shioyasakiensis Ref Strain: SE3
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Gammaproteobacteria Order: Alteromonadales Family: Pseudoalteromonadaceae Genus: Pseudoalteromonas
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Vizag transact
Collection Depth: 300 m
Transect Distance: 200 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
3,909
Total CDS Genes
108 tRNA • 4 rRNA
4.41 Mbp
Assembly Size
GC: 41.4% • 150 Contigs
178
CAZyme Genes
66 high-confidence (3 tools)
135
Industrial Enzymes
10 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM1520 Assembly Type Draft
Total CDS Genes 3,909 Total Assembly Length 4,412,606 bp (4.41 Mbp)
tRNA / rRNA Genes 108 tRNA / 4 rRNA GC Content (%) 41.41%
Simple Repeats / Low-Complexity 231 repeats / 31 low-comp Contigs / N50 150 contigs • N50: 88,951 bp (L50 = 14)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 83 GH • 58 GT • 15 CE • 0 PL • 11 AA • 31 CBM N90 / auN Metric N90: — • auN: —
Industrial Enzymes Detected 135 genes across 10 classes (Lignin peroxidase, Protease, Phosphatase, Glutaminase, Esterase, Xylanase, Lipase, Chitinase...)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM1520

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.