All strains

ILSM1525

• Pseudomonas psychrophila
Pseudomonadota 99.9% 16S Similarity (Ref: E-3) Vizag transact • 300 m (Water) WGS Sequenced
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Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 99.9%
EzCloud Identification & Lineage Hierarchy
Identified Species: Pseudomonas psychrophila Ref Strain: E-3
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Gammaproteobacteria Order: Pseudomonadales Family: Pseudomonadaceae Genus: Pseudomonas
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Vizag transact
Collection Depth: 300 m
Transect Distance: Surface

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
4,548
Total CDS Genes
75 tRNA • 6 rRNA
5.07 Mbp
Assembly Size
GC: 59.3% • 107 Contigs
182
CAZyme Genes
53 high-confidence (3 tools)
168
Industrial Enzymes
8 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM1525 Assembly Type Draft
Total CDS Genes 4,548 Total Assembly Length 5,068,087 bp (5.07 Mbp)
tRNA / rRNA Genes 75 tRNA / 6 rRNA GC Content (%) 59.30%
Simple Repeats / Low-Complexity 196 repeats / 12 low-comp Contigs / N50 107 contigs • N50: 181,535 bp (L50 = 10)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 70 GH • 85 GT • 8 CE • 1 PL • 12 AA • 13 CBM N90 / auN Metric N90: — • auN: —
Industrial Enzymes Detected 168 genes across 8 classes (Lignin peroxidase, Protease, Phosphatase, Urease, Esterase, Glutaminase, Lipase, Laccase)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM1525

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.