All strains

ILSM1575

• Pseudoalteromonas shioyasakiensis
Pseudomonadota 100% 16S Similarity (Ref: SE3) Vizag transact • 50 m (Water) WGS Sequenced
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Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 100%
EzCloud Identification & Lineage Hierarchy
Identified Species: Pseudoalteromonas shioyasakiensis Ref Strain: SE3
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Gammaproteobacteria Order: Alteromonadales Family: Pseudoalteromonadaceae Genus: Pseudoalteromonas
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Vizag transact
Collection Depth: 50 m
Transect Distance: —

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
4,006
Total CDS Genes
100 tRNA • 4 rRNA
4.49 Mbp
Assembly Size
GC: 41.3% • 65 Contigs
176
CAZyme Genes
64 high-confidence (3 tools)
133
Industrial Enzymes
11 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM1575 Assembly Type Draft
Total CDS Genes 4,006 Total Assembly Length 4,487,017 bp (4.49 Mbp)
tRNA / rRNA Genes 100 tRNA / 4 rRNA GC Content (%) 41.33%
Simple Repeats / Low-Complexity 243 repeats / 32 low-comp Contigs / N50 65 contigs • N50: 240,416 bp (L50 = 7)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 84 GH • 54 GT • 13 CE • 1 PL • 11 AA • 35 CBM N90 / auN Metric N90: — • auN: —
Industrial Enzymes Detected 133 genes across 11 classes (Lignin peroxidase, Protease, Phosphatase, Glutaminase, Esterase, Amylase, Xylanase, Lipase...)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM1575

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.