All strains

ILSM1584

• Pseudomonas saliphila
Pseudomonadota 98.93% 16S Similarity (Ref: 16W4-4-3) Vizag transact • 50 m (Water) WGS Sequenced
Search Files in Index
Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 98.93%
EzCloud Identification & Lineage Hierarchy
Identified Species: Pseudomonas saliphila Ref Strain: 16W4-4-3
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Gammaproteobacteria Order: Pseudomonadales Family: Pseudomonadaceae Genus: Halopseudomonas
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Vizag transact
Collection Depth: 50 m
Transect Distance: —

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
3,526
Total CDS Genes
47 tRNA • 3 rRNA
3.84 Mbp
Assembly Size
GC: 58.4% • 25 Contigs
173
CAZyme Genes
58 high-confidence (3 tools)
133
Industrial Enzymes
8 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM1584 Assembly Type Draft
Total CDS Genes 3,526 Total Assembly Length 3,839,091 bp (3.84 Mbp)
tRNA / rRNA Genes 47 tRNA / 3 rRNA GC Content (%) 58.43%
Simple Repeats / Low-Complexity 136 repeats / 3 low-comp Contigs / N50 25 contigs • N50: 483,689 bp (L50 = 4)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 71 GH • 67 GT • 11 CE • 4 PL • 10 AA • 17 CBM N90 / auN Metric N90: — • auN: —
Industrial Enzymes Detected 133 genes across 8 classes (Lignin peroxidase, Protease, Phosphatase, Glutaminase, Urease, Esterase, Lipase, Laccase)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM1584

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.