All strains

ILSM1604

• Pseudoalteromonas tetraodonis
Pseudomonadota 100% 16S Similarity (Ref: GFC) Vizag transact • 20 m (Water) WGS Sequenced
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Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 100%
EzCloud Identification & Lineage Hierarchy
Identified Species: Pseudoalteromonas tetraodonis Ref Strain: GFC
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Gammaproteobacteria Order: Alteromonadales Family: Pseudoalteromonadaceae Genus: Pseudoalteromonas
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Vizag transact
Collection Depth: 20 m
Transect Distance: 10 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
3,326
Total CDS Genes
104 tRNA • 6 rRNA
3.61 Mbp
Assembly Size
GC: 40.4% • 122 Contigs
124
CAZyme Genes
37 high-confidence (3 tools)
114
Industrial Enzymes
7 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM1604 Assembly Type Draft
Total CDS Genes 3,326 Total Assembly Length 3,614,426 bp (3.61 Mbp)
tRNA / rRNA Genes 104 tRNA / 6 rRNA GC Content (%) 40.37%
Simple Repeats / Low-Complexity 155 repeats / 25 low-comp Contigs / N50 122 contigs • N50: 69,862 bp (L50 = 16)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 63 GH • 39 GT • 5 CE • 0 PL • 9 AA • 17 CBM N90 / auN Metric N90: 22,837 bp • auN: 90,039.0
Industrial Enzymes Detected 114 genes across 7 classes (Lignin peroxidase, Protease, Phosphatase, Glutaminase, Esterase, Amylase, Laccase)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM1604

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.