All strains

ILSM2013

• Halomonas meridiana
Pseudomonadota 99.93% 16S Similarity (Ref: DSM 5425) Chilika transact • 300 m (Water) WGS Sequenced
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Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 99.93%
EzCloud Identification & Lineage Hierarchy
Identified Species: Halomonas meridiana Ref Strain: DSM 5425
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Gammaproteobacteria Order: Oceanospirillales Family: Halomonadaceae Genus: Vreelandella
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Chilika transact
Collection Depth: 300 m
Transect Distance: 10 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
3,350
Total CDS Genes
67 tRNA • 4 rRNA
3.57 Mbp
Assembly Size
GC: 56.8% • 168 Contigs
134
CAZyme Genes
41 high-confidence (3 tools)
121
Industrial Enzymes
9 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM2013 Assembly Type Draft
Total CDS Genes 3,350 Total Assembly Length 3,567,680 bp (3.57 Mbp)
tRNA / rRNA Genes 67 tRNA / 4 rRNA GC Content (%) 56.79%
Simple Repeats / Low-Complexity 105 repeats / 4 low-comp Contigs / N50 168 contigs • N50: 65,965 bp (L50 = 19)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 55 GH • 62 GT • 5 CE • 0 PL • 10 AA • 10 CBM N90 / auN Metric N90: — • auN: —
Industrial Enzymes Detected 121 genes across 9 classes (Lignin peroxidase, Protease, Phosphatase, Urease, Esterase, Glutaminase, Amylase, Xylanase...)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM2013

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.