All strains

ILSM2022

• Vibrio campbellii
Pseudomonadota 100% 16S Similarity (Ref: CAIM 519) Chilika transact • 50 m (Water) WGS Sequenced
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Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 100%
EzCloud Identification & Lineage Hierarchy
Identified Species: Vibrio campbellii Ref Strain: CAIM 519
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Gammaproteobacteria Order: Vibrionales Family: Vibrionaceae Genus: Vibrio
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Chilika transact
Collection Depth: 50 m
Transect Distance: 10 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
5,139
Total CDS Genes
119 tRNA • 8 rRNA
5.71 Mbp
Assembly Size
GC: 45.3% • 205 Contigs
209
CAZyme Genes
84 high-confidence (3 tools)
168
Industrial Enzymes
11 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM2022 Assembly Type Draft
Total CDS Genes 5,139 Total Assembly Length 5,709,861 bp (5.71 Mbp)
tRNA / rRNA Genes 119 tRNA / 8 rRNA GC Content (%) 45.34%
Simple Repeats / Low-Complexity 148 repeats / 22 low-comp Contigs / N50 205 contigs • N50: 63,376 bp (L50 = 28)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 102 GH • 65 GT • 9 CE • 0 PL • 8 AA • 47 CBM N90 / auN Metric N90: — • auN: —
Industrial Enzymes Detected 168 genes across 11 classes (Lignin peroxidase, Protease, Phosphatase, Esterase, Glutaminase, Amylase, Beta-glucosidase, Lipase...)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM2022

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.