All strains

ILSM2038

• Pseudomonas aeruginosa
Pseudomonadota 100% 16S Similarity (Ref: JCM 5962) Chilika transact • 20 m (Sediment) WGS Sequenced
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Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 100%
EzCloud Identification & Lineage Hierarchy
Identified Species: Pseudomonas aeruginosa Ref Strain: JCM 5962
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Gammaproteobacteria Order: Pseudomonadales Family: Pseudomonadaceae Genus: Pseudomonas
Oceanographic Collection Provenance
Sample Matrix: Sediment
Sampling Location: Chilika transact
Collection Depth: 20 m
Transect Distance: Sediment

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
5,922
Total CDS Genes
65 tRNA • 3 rRNA
6.50 Mbp
Assembly Size
GC: 66.2% • 114 Contigs
232
CAZyme Genes
73 high-confidence (3 tools)
202
Industrial Enzymes
9 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM2038 Assembly Type Draft
Total CDS Genes 5,922 Total Assembly Length 6,500,157 bp (6.50 Mbp)
tRNA / rRNA Genes 65 tRNA / 3 rRNA GC Content (%) 66.22%
Simple Repeats / Low-Complexity 1080 repeats / 28 low-comp Contigs / N50 114 contigs • N50: 205,404 bp (L50 = 11)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 85 GH • 102 GT • 11 CE • 4 PL • 14 AA • 26 CBM N90 / auN Metric N90: — • auN: —
Industrial Enzymes Detected 202 genes across 9 classes (Lignin peroxidase, Protease, Phosphatase, Esterase, Glutaminase, Urease, Lipase, Alginate lyase...)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM2038

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.