All strains

ILSM2079

• Shewanella algae
Pseudomonadota 100% 16S Similarity (Ref: JCM 21037) Chilika transact • 20 m (Water) WGS Sequenced
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Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 100%
EzCloud Identification & Lineage Hierarchy
Identified Species: Shewanella algae Ref Strain: JCM 21037
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Gammaproteobacteria Order: Alteromonadales Family: Shewanellaceae Genus: Shewanella
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Chilika transact
Collection Depth: 20 m
Transect Distance: Surface

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
4,246
Total CDS Genes
111 tRNA • 9 rRNA
4.79 Mbp
Assembly Size
GC: 53.1% • 116 Contigs
141
CAZyme Genes
43 high-confidence (3 tools)
135
Industrial Enzymes
7 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM2079 Assembly Type Draft
Total CDS Genes 4,246 Total Assembly Length 4,793,179 bp (4.79 Mbp)
tRNA / rRNA Genes 111 tRNA / 9 rRNA GC Content (%) 53.09%
Simple Repeats / Low-Complexity 115 repeats / 6 low-comp Contigs / N50 116 contigs • N50: 101,840 bp (L50 = 14)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 58 GH • 51 GT • 12 CE • 0 PL • 8 AA • 21 CBM N90 / auN Metric N90: — • auN: —
Industrial Enzymes Detected 135 genes across 7 classes (Lignin peroxidase, Protease, Phosphatase, Esterase, Glutaminase, Urease, Laccase)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM2079

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.