All strains

ILSM2093

• Pseudomonas aeruginosa
Pseudomonadota 100% 16S Similarity (Ref: JCM 5962) Chilika transact • 50 m (Water) WGS Sequenced
Search Files in Index
Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 100%
EzCloud Identification & Lineage Hierarchy
Identified Species: Pseudomonas aeruginosa Ref Strain: JCM 5962
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Gammaproteobacteria Order: Pseudomonadales Family: Pseudomonadaceae Genus: Pseudomonas
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Chilika transact
Collection Depth: 50 m
Transect Distance: 50 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
14,148
Total CDS Genes
187 tRNA • 14 rRNA
16.01 Mbp
Assembly Size
GC: 56.0% • 2487 Contigs
486
CAZyme Genes
162 high-confidence (3 tools)
459
Industrial Enzymes
12 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM2093 Assembly Type Draft
Total CDS Genes 14,148 Total Assembly Length 16,014,821 bp (16.01 Mbp)
tRNA / rRNA Genes 187 tRNA / 14 rRNA GC Content (%) 55.99%
Simple Repeats / Low-Complexity 1279 repeats / 62 low-comp Contigs / N50 2487 contigs • N50: 75,712 bp (L50 = 49)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 203 GH • 195 GT • 27 CE • 5 PL • 26 AA • 63 CBM N90 / auN Metric N90: — • auN: —
Industrial Enzymes Detected 459 genes across 12 classes (Lignin peroxidase, Protease, Phosphatase, Esterase, Glutaminase, Urease, Lipase, Laccase...)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM2093

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.