All strains

ILSM2139

• Halomonas meridiana
Pseudomonadota 100% 16S Similarity (Ref: DSM 5425) Chilika transact • 300 m (Sediment) WGS Sequenced
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Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 100%
EzCloud Identification & Lineage Hierarchy
Identified Species: Halomonas meridiana Ref Strain: DSM 5425
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Gammaproteobacteria Order: Oceanospirillales Family: Halomonadaceae Genus: Vreelandella
Oceanographic Collection Provenance
Sample Matrix: Sediment
Sampling Location: Chilika transact
Collection Depth: 300 m
Transect Distance: Sediment

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
3,319
Total CDS Genes
65 tRNA • 9 rRNA
3.52 Mbp
Assembly Size
GC: 57.0% • 243 Contigs
121
CAZyme Genes
33 high-confidence (3 tools)
118
Industrial Enzymes
7 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM2139 Assembly Type Draft
Total CDS Genes 3,319 Total Assembly Length 3,519,173 bp (3.52 Mbp)
tRNA / rRNA Genes 65 tRNA / 9 rRNA GC Content (%) 56.99%
Simple Repeats / Low-Complexity 114 repeats / 3 low-comp Contigs / N50 243 contigs • N50: 50,101 bp (L50 = 22)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 51 GH • 52 GT • 4 CE • 0 PL • 9 AA • 10 CBM N90 / auN Metric N90: — • auN: —
Industrial Enzymes Detected 118 genes across 7 classes (Lignin peroxidase, Protease, Phosphatase, Urease, Esterase, Glutaminase, Laccase)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM2139

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.