All strains

ILSM3004

• Qipengyuania pacifica
Pseudomonadota 100% 16S Similarity (Ref: NZ-96(T)) Krishna transact • 50 m (Water) WGS Sequenced
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Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 100%
EzCloud Identification & Lineage Hierarchy
Identified Species: Qipengyuania pacifica Ref Strain: NZ-96(T)
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Alphaproteobacteria Order: Sphingomonadales Family: Erythrobacteraceae Genus: Qipengyuania
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Krishna transact
Collection Depth: 50 m
Transect Distance: 100 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
3,135
Total CDS Genes
50 tRNA • 3 rRNA
3.28 Mbp
Assembly Size
GC: 60.9% • 17 Contigs
130
CAZyme Genes
57 high-confidence (3 tools)
91
Industrial Enzymes
8 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM3004 Assembly Type Draft
Total CDS Genes 3,135 Total Assembly Length 3,282,257 bp (3.28 Mbp)
tRNA / rRNA Genes 50 tRNA / 3 rRNA GC Content (%) 60.86%
Simple Repeats / Low-Complexity 161 repeats / 2 low-comp Contigs / N50 17 contigs • N50: 852,124 bp (L50 = 2)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 56 GH • 59 GT • 5 CE • 3 PL • 8 AA • 4 CBM N90 / auN Metric N90: — • auN: —
Industrial Enzymes Detected 91 genes across 8 classes (Lignin peroxidase, Protease, Phosphatase, Esterase, Glutaminase, Amylase, Beta-glucosidase, Laccase)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM3004

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.