All strains

ILSM3015

• Pelagibacterium lixinzhangensis
Proteobacteria 99.79% 16S Similarity (Ref: H642) Krishna transact • 10 m (Water) WGS Sequenced
Search Files in Index
Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 99.79%
EzCloud Identification & Lineage Hierarchy
Identified Species: Pelagibacterium lixinzhangensis Ref Strain: H642
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Proteobacteria Class: Alphaproteobacteria Order: Rhizobiales Family: Devosiaceae Genus: Pelagibacterium
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Krishna transact
Collection Depth: 10 m
Transect Distance: 100 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
3,621
Total CDS Genes
48 tRNA • 6 rRNA
3.69 Mbp
Assembly Size
GC: 62.4% • 12 Contigs
0
CAZyme Genes
0 high-confidence (3 tools)
93
Industrial Enzymes
9 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM3015 Assembly Type Draft
Total CDS Genes 3,621 Total Assembly Length 3,693,014 bp (3.69 Mbp)
tRNA / rRNA Genes 48 tRNA / 6 rRNA GC Content (%) 62.36%
Simple Repeats / Low-Complexity 0 repeats / 0 low-comp Contigs / N50 12 contigs • N50: 640,776 bp (L50 = 2)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 0 GH • 0 GT • 0 CE • 0 PL • 0 AA • 0 CBM N90 / auN Metric N90: — • auN: —
Industrial Enzymes Detected 93 genes across 9 classes (Lignin peroxidase, Protease, Phosphatase, Urease, Laccase, Glutaminase, Esterase, Amylase...)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM3015

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.