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ILSM3032

• Vibrio variabilis
Pseudomonadota 99.14% 16S Similarity (Ref: R-40492) Godavari transact • 100 m (Water) WGS Sequenced
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Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 99.14%
EzCloud Identification & Lineage Hierarchy
Identified Species: Vibrio variabilis Ref Strain: R-40492
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Gammaproteobacteria Order: Vibrionales Family: Vibrionaceae Genus: Vibrio
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Godavari transact
Collection Depth: 100 m
Transect Distance: 100 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
4,787
Total CDS Genes
124 tRNA • 7 rRNA
5.15 Mbp
Assembly Size
GC: 45.7% • 175 Contigs
180
CAZyme Genes
73 high-confidence (3 tools)
147
Industrial Enzymes
11 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM3032 Assembly Type Draft
Total CDS Genes 4,787 Total Assembly Length 5,152,353 bp (5.15 Mbp)
tRNA / rRNA Genes 124 tRNA / 7 rRNA GC Content (%) 45.68%
Simple Repeats / Low-Complexity 0 repeats / 0 low-comp Contigs / N50 175 contigs • N50: 81,476 bp (L50 = 22)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 96 GH • 60 GT • 9 CE • 1 PL • 7 AA • 28 CBM N90 / auN Metric N90: — • auN: —
Industrial Enzymes Detected 147 genes across 11 classes (Lignin peroxidase, Protease, Phosphatase, Urease, Glutaminase, Esterase, Lipase, Laccase...)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM3032

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.