All strains

ILSM3098

• Brevibacterium casei
Actinomycetota 99.37% 16S Similarity (Ref: NCDO 2048) Krishna transact • 100 m (Water) WGS Sequenced
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Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 99.37%
EzCloud Identification & Lineage Hierarchy
Identified Species: Brevibacterium casei Ref Strain: NCDO 2048
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Actinomycetota Class: Actinomycetia Order: Brevibacteriales Family: Brevibacteriaceae Genus: Brevibacterium
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Krishna transact
Collection Depth: 100 m
Transect Distance: 100 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
3,280
Total CDS Genes
52 tRNA • 3 rRNA
3.71 Mbp
Assembly Size
GC: 68.2% • 60 Contigs
111
CAZyme Genes
38 high-confidence (3 tools)
79
Industrial Enzymes
8 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM3098 Assembly Type Draft
Total CDS Genes 3,280 Total Assembly Length 3,708,835 bp (3.71 Mbp)
tRNA / rRNA Genes 52 tRNA / 3 rRNA GC Content (%) 68.24%
Simple Repeats / Low-Complexity 1211 repeats / 60 low-comp Contigs / N50 60 contigs • N50: 177,916 bp (L50 = 6)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 40 GH • 53 GT • 9 CE • 0 PL • 8 AA • 11 CBM N90 / auN Metric N90: 49,240 bp • auN: 229,082.5
Industrial Enzymes Detected 79 genes across 8 classes (Protease, Lignin peroxidase, Phosphatase, Esterase, Urease, Laccase, Lipase, Glutaminase)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM3098

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.