All strains

ILSM3104

• Pelagibacterium lixinzhangensis
Pseudomonadota 99.79% 16S Similarity (Ref: H642) Godavari transact (Sediment) WGS Sequenced
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Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 99.79%
EzCloud Identification & Lineage Hierarchy
Identified Species: Pelagibacterium lixinzhangensis Ref Strain: H642
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Alphaproteobacteria Order: Hyphomicrobiales Family: Devosiaceae Genus: Pelagibacterium
Oceanographic Collection Provenance
Sample Matrix: Sediment
Sampling Location: Godavari transact
Collection Depth: —
Transect Distance: 100 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
3,622
Total CDS Genes
48 tRNA • 6 rRNA
3.69 Mbp
Assembly Size
GC: 62.4% • 13 Contigs
150
CAZyme Genes
52 high-confidence (3 tools)
93
Industrial Enzymes
9 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM3104 Assembly Type Draft
Total CDS Genes 3,622 Total Assembly Length 3,692,771 bp (3.69 Mbp)
tRNA / rRNA Genes 48 tRNA / 6 rRNA GC Content (%) 62.36%
Simple Repeats / Low-Complexity 242 repeats / 12 low-comp Contigs / N50 13 contigs • N50: 455,997 bp (L50 = 3)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 79 GH • 52 GT • 10 CE • 0 PL • 7 AA • 13 CBM N90 / auN Metric N90: — • auN: —
Industrial Enzymes Detected 93 genes across 9 classes (Lignin peroxidase, Protease, Phosphatase, Urease, Laccase, Glutaminase, Esterase, Amylase...)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM3104

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.