All strains

ILSM3108

• Marinobacter litoralis
Pseudomonadota 99.86% 16S Similarity (Ref: SW-45) Krishna transact • 100 m (Sediment) WGS Sequenced
Search Files in Index
Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 99.86%
EzCloud Identification & Lineage Hierarchy
Identified Species: Marinobacter litoralis Ref Strain: SW-45
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Gammaproteobacteria Order: Cellvibrionales Family: Marinobacteraceae Genus: Marinobacter
Oceanographic Collection Provenance
Sample Matrix: Sediment
Sampling Location: Krishna transact
Collection Depth: 100 m
Transect Distance: 100 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
3,421
Total CDS Genes
54 tRNA • 3 rRNA
3.76 Mbp
Assembly Size
GC: 54.4% • 16 Contigs
130
CAZyme Genes
33 high-confidence (3 tools)
141
Industrial Enzymes
8 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM3108 Assembly Type Draft
Total CDS Genes 3,421 Total Assembly Length 3,759,444 bp (3.76 Mbp)
tRNA / rRNA Genes 54 tRNA / 3 rRNA GC Content (%) 54.39%
Simple Repeats / Low-Complexity 0 repeats / 0 low-comp Contigs / N50 16 contigs • N50: 902,087 bp (L50 = 2)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 48 GH • 58 GT • 7 CE • 1 PL • 11 AA • 9 CBM N90 / auN Metric N90: — • auN: —
Industrial Enzymes Detected 141 genes across 8 classes (Lignin peroxidase, Protease, Urease, Phosphatase, Esterase, Lipase, Glutaminase, Laccase)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM3108

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.