All strains

ILSM3123

• Pseudorhizobium halotolerans
Pseudomonadota 100% 16S Similarity (Ref: AB21) Godavari transact • Sediment (Sediment) WGS Sequenced
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Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 100%
EzCloud Identification & Lineage Hierarchy
Identified Species: Pseudorhizobium halotolerans Ref Strain: AB21
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Alphaproteobacteria Order: Hyphomicrobiales Family: Rhizobiaceae Genus: Pseudorhizobium
Oceanographic Collection Provenance
Sample Matrix: Sediment
Sampling Location: Godavari transact
Collection Depth: Sediment
Transect Distance: 20 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
4,120
Total CDS Genes
49 tRNA • 3 rRNA
4.21 Mbp
Assembly Size
GC: 62.1% • 153 Contigs
189
CAZyme Genes
77 high-confidence (3 tools)
105
Industrial Enzymes
10 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM3123 Assembly Type Draft
Total CDS Genes 4,120 Total Assembly Length 4,214,948 bp (4.21 Mbp)
tRNA / rRNA Genes 49 tRNA / 3 rRNA GC Content (%) 62.05%
Simple Repeats / Low-Complexity 229 repeats / 6 low-comp Contigs / N50 153 contigs • N50: 195,567 bp (L50 = 8)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 89 GH • 71 GT • 12 CE • 1 PL • 16 AA • 15 CBM N90 / auN Metric N90: 17,998 bp • auN: 201,167.5
Industrial Enzymes Detected 105 genes across 10 classes (Lignin peroxidase, Protease, Phosphatase, Urease, Esterase, Glutaminase, Laccase, Amylase...)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM3123

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.