All strains

ILSM3124

• JYII_s
Pseudomonadota 99.93% 16S Similarity (Ref: HJ) Godavari transact • Sediment (Sediment) WGS Sequenced
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Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 99.93%
EzCloud Identification & Lineage Hierarchy
Identified Species: JYII_s Ref Strain: HJ
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Alphaproteobacteria Order: Rhodospirillales Family: Thalassospiraceae Genus: Thalassospira
Oceanographic Collection Provenance
Sample Matrix: Sediment
Sampling Location: Godavari transact
Collection Depth: Sediment
Transect Distance: 20 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
3,973
Total CDS Genes
70 tRNA • 5 rRNA
4.24 Mbp
Assembly Size
GC: 54.9% • 273 Contigs
140
CAZyme Genes
40 high-confidence (3 tools)
103
Industrial Enzymes
8 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM3124 Assembly Type Draft
Total CDS Genes 3,973 Total Assembly Length 4,243,313 bp (4.24 Mbp)
tRNA / rRNA Genes 70 tRNA / 5 rRNA GC Content (%) 54.91%
Simple Repeats / Low-Complexity 101 repeats / 6 low-comp Contigs / N50 273 contigs • N50: 32,847 bp (L50 = 38)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 56 GH • 63 GT • 7 CE • 0 PL • 13 AA • 9 CBM N90 / auN Metric N90: 8,540 bp • auN: 42,845.2
Industrial Enzymes Detected 103 genes across 8 classes (Lignin peroxidase, Protease, Phosphatase, Urease, Esterase, Glutaminase, Laccase, Beta-glucosidase)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM3124

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.