All strains

ILSM3161

• Halomonas meridiana
Pseudomonadota 100% 16S Similarity (Ref: DSM 5425) Godavari transact • 300 m (Water) WGS Sequenced
Search Files in Index
Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 100%
EzCloud Identification & Lineage Hierarchy
Identified Species: Halomonas meridiana Ref Strain: DSM 5425
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Gammaproteobacteria Order: Oceanospirillales Family: Halomonadaceae Genus: Vreelandella
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Godavari transact
Collection Depth: 300 m
Transect Distance: 300 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
3,326
Total CDS Genes
68 tRNA • 4 rRNA
3.46 Mbp
Assembly Size
GC: 57.0% • 130 Contigs
117
CAZyme Genes
34 high-confidence (3 tools)
119
Industrial Enzymes
8 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM3161 Assembly Type Draft
Total CDS Genes 3,326 Total Assembly Length 3,460,449 bp (3.46 Mbp)
tRNA / rRNA Genes 68 tRNA / 4 rRNA GC Content (%) 56.95%
Simple Repeats / Low-Complexity 108 repeats / 3 low-comp Contigs / N50 130 contigs • N50: 86,012 bp (L50 = 15)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 52 GH • 48 GT • 4 CE • 0 PL • 10 AA • 8 CBM N90 / auN Metric N90: 21,982 bp • auN: 89,282.5
Industrial Enzymes Detected 119 genes across 8 classes (Lignin peroxidase, Protease, Phosphatase, Urease, Esterase, Glutaminase, Amylase, Laccase)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM3161

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.