All strains

ILSM3180

• Kocuria palustris
Actinomycetota 100% 16S Similarity (Ref: DSM 11925) Krishna transact • 100 m (Water) WGS Sequenced
Search Files in Index
Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 100%
EzCloud Identification & Lineage Hierarchy
Identified Species: Kocuria palustris Ref Strain: DSM 11925
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Actinomycetota Class: Actinomycetia Order: Micrococcales Family: Micrococcaceae Genus: Kocuria
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Krishna transact
Collection Depth: 100 m
Transect Distance: 100 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
2,587
Total CDS Genes
50 tRNA • 3 rRNA
2.91 Mbp
Assembly Size
GC: 70.2% • 208 Contigs
119
CAZyme Genes
50 high-confidence (3 tools)
62
Industrial Enzymes
9 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM3180 Assembly Type Draft
Total CDS Genes 2,587 Total Assembly Length 2,909,541 bp (2.91 Mbp)
tRNA / rRNA Genes 50 tRNA / 3 rRNA GC Content (%) 70.24%
Simple Repeats / Low-Complexity 622 repeats / 36 low-comp Contigs / N50 208 contigs • N50: 37,342 bp (L50 = 24)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 45 GH • 56 GT • 7 CE • 1 PL • 5 AA • 14 CBM N90 / auN Metric N90: 6,299 bp • auN: 43,827.3
Industrial Enzymes Detected 62 genes across 9 classes (Lignin peroxidase, Protease, Phosphatase, Urease, Laccase, Esterase, Amylase, Lipase...)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM3180

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.