All strains

ILSM3186

• Vibrio chagasii
Pseudomonadota 100% 16S Similarity (Ref: R-3712) Krishna transact • 100 m (Water) WGS Sequenced
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Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 100%
EzCloud Identification & Lineage Hierarchy
Identified Species: Vibrio chagasii Ref Strain: R-3712
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Gammaproteobacteria Order: Vibrionales Family: Vibrionaceae Genus: Vibrio
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Krishna transact
Collection Depth: 100 m
Transect Distance: 100 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
4,450
Total CDS Genes
138 tRNA • 9 rRNA
4.88 Mbp
Assembly Size
GC: 44.2% • 105 Contigs
167
CAZyme Genes
62 high-confidence (3 tools)
144
Industrial Enzymes
11 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM3186 Assembly Type Draft
Total CDS Genes 4,450 Total Assembly Length 4,880,616 bp (4.88 Mbp)
tRNA / rRNA Genes 138 tRNA / 9 rRNA GC Content (%) 44.24%
Simple Repeats / Low-Complexity 140 repeats / 14 low-comp Contigs / N50 105 contigs • N50: 135,688 bp (L50 = 13)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 81 GH • 57 GT • 8 CE • 0 PL • 7 AA • 32 CBM N90 / auN Metric N90: 40,936 bp • auN: 140,883.4
Industrial Enzymes Detected 144 genes across 11 classes (Lignin peroxidase, Protease, Phosphatase, Esterase, Amylase, Lipase, Beta-glucosidase, Laccase...)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM3186

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.