All strains

ILSM3191

• Sphingobium naphthae
Pseudomonadota 99.64% 16S Similarity (Ref: K-3-6) Krishna transact • 50 m (Water) WGS Sequenced
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Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 99.64%
EzCloud Identification & Lineage Hierarchy
Identified Species: Sphingobium naphthae Ref Strain: K-3-6
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Alphaproteobacteria Order: Sphingomonadales Family: Sphingomonadaceae Genus: Sphingobium
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Krishna transact
Collection Depth: 50 m
Transect Distance: 100 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
3,899
Total CDS Genes
60 tRNA • 4 rRNA
4.06 Mbp
Assembly Size
GC: 65.7% • 236 Contigs
204
CAZyme Genes
100 high-confidence (3 tools)
94
Industrial Enzymes
8 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM3191 Assembly Type Draft
Total CDS Genes 3,899 Total Assembly Length 4,061,301 bp (4.06 Mbp)
tRNA / rRNA Genes 60 tRNA / 4 rRNA GC Content (%) 65.71%
Simple Repeats / Low-Complexity 863 repeats / 34 low-comp Contigs / N50 236 contigs • N50: 53,821 bp (L50 = 23)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 106 GH • 68 GT • 8 CE • 5 PL • 17 AA • 19 CBM N90 / auN Metric N90: 12,213 bp • auN: 63,644.2
Industrial Enzymes Detected 94 genes across 8 classes (Lignin peroxidase, Protease, Phosphatase, Esterase, Beta-glucosidase, Laccase, Glutaminase, Amylase)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM3191

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.