All strains

ILSM3202

• Vibrio parahaemolyticus
Pseudomonadota 100% 16S Similarity (Ref: NBRC 12711) Godavari transact • 10 m (Water) WGS Sequenced
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Curated Isolate Taxonomic Identification & Collection Provenance
16S rRNA Similarity: 100%
EzCloud Identification & Lineage Hierarchy
Identified Species: Vibrio parahaemolyticus Ref Strain: NBRC 12711
Lineage Classification (Top Hit Taxon):
Domain: Bacteria Phylum: Pseudomonadota Class: Gammaproteobacteria Order: Vibrionales Family: Vibrionaceae Genus: Vibrio
Oceanographic Collection Provenance
Sample Matrix: Water
Sampling Location: Godavari transact
Collection Depth: 10 m
Transect Distance: 100 m

1. Genomics & WGS Features

Sample-level genome architecture, CAZyme annotation, QUAST assembly statistics, and industrial bioprospecting profiles.

Download WGS CSVs
4,964
Total CDS Genes
115 tRNA • 8 rRNA
5.36 Mbp
Assembly Size
GC: 45.5% • 319 Contigs
191
CAZyme Genes
82 high-confidence (3 tools)
167
Industrial Enzymes
10 Classes detected
Detailed Genome & Assembly Metrics
Isolate Identifier ILSM3202 Assembly Type Draft
Total CDS Genes 4,964 Total Assembly Length 5,359,272 bp (5.36 Mbp)
tRNA / rRNA Genes 115 tRNA / 8 rRNA GC Content (%) 45.53%
Simple Repeats / Low-Complexity 128 repeats / 18 low-comp Contigs / N50 319 contigs • N50: 39,675 bp (L50 = 41)
CAZyme Classes (GH/GT/CE/PL/AA/CBM) 98 GH • 59 GT • 9 CE • 2 PL • 10 AA • 35 CBM N90 / auN Metric N90: 10,916 bp • auN: 47,366.7
Industrial Enzymes Detected 167 genes across 10 classes (Lignin peroxidase, Protease, Phosphatase, Esterase, Amylase, Glutaminase, Beta-glucosidase, Lipase...)

2. Proteomics

Protein profiles — coming soon

Accession-level abundance and UniProt/NCBI mappings will appear here.

3. Metabolomics and Bioprospecting

No metabolomics screening data for ILSM3202

Metabolite profiling for this strain is currently pending laboratory extraction and LC-MS analysis.